Re: Copy Bulk Ignore Duplicated

From: Adrian Klaver <adrian(dot)klaver(at)aklaver(dot)com>
To: Leandro Guimarães <leo(dot)guimaraes(at)gmail(dot)com>, Tim Cross <theophilusx(at)gmail(dot)com>
Cc: pgsql-general(at)lists(dot)postgresql(dot)org, pgsql-general(at)postgresql(dot)org
Subject: Re: Copy Bulk Ignore Duplicated
Date: 2019-06-15 13:44:55
Message-ID: c426e95f-3144-410b-413c-4c6b016d7d2b@aklaver.com
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On 6/14/19 7:24 PM, Leandro Guimarães wrote:
> Hi Tim, thanks for you answer!
>
> The columns were just examples, but let me explain the database
> structure, the fields in *bold are the keys*:
>
> *customer_id integer*
> *date_time timestamp*
> *indicator_id integer*
> *element_id integer*
> indicator_value double precision

Huh, earlier you said you had a check constraint that was causing issues.

Does that also exist or where you referring to the keys above?

Are the keys above formally defined as the PRIMARY KEY?
-
>
> The table is partitioned per day and customer_id (it works great) the
> problem is just the duplicated key situation that I'm really worried about.
>
> I populate the database via a Java Application with JDBC.
>
> Maybe this info could help to provide some light!
>
> Thanks Again!
>
> Leandro Guimarães
>
>
>
> On Fri, Jun 14, 2019 at 7:39 PM Tim Cross <theophilusx(at)gmail(dot)com
> <mailto:theophilusx(at)gmail(dot)com>> wrote:
>
>
> Leandro Guimarães <leo(dot)guimaraes(at)gmail(dot)com
> <mailto:leo(dot)guimaraes(at)gmail(dot)com>> writes:
>
> > Hi,
> >
> >    I have a scenario with a large table and I'm trying to insert
> it via a
> > COPY command with a csv file.
> >
> >    Everything works, but sometimes my source .csv file has
> duplicated data
> > in the previously fulfilled table. If I add a check constraint
> and try to
> > run the COPY command I have an error that stops the whole insertion.
> >
> >   I've tried to put the data in a tmp table and fill the main using
> > distinct this way (the fields and names are just examples):
> >
> > INSERT INTO final_table values (name, document)
> >    SELECT DISTINCT name, document
> >    FROM tmp_TABLE t1
> >    WHERE NOT EXISTS (
> >    SELECT 1 FROM final_table t2
> >    WHERE (t2.name <http://t2.name>, t2.document)
> >    IS NOT DISTINCT FROM (t1.name <http://t1.name>, t1.document))
> >
> > The problem is that my final_table is a large (and partitioned)
> table and
> > this query is taking a long time to execute.
> >
> > Someone have any idea (really guys anything would be great) how
> to solve
> > this situation? I need to ignore duplicates instead to have some
> error.
> >
> > I'm using* PostgreSQL 9.4* so I can't use "ON CONFLICT" and
> upgrade is not
> > an option.
> >
>
> Explain plan would probably shed some light, but I suspect your
> performance is being heavily hit by the sub query. Distinct is an
> expensive operation and you are performing it once for every
> distinct row
> in your temp table.
>
> It isn't clear what the primary key is for your final table - name +
> document seems suspicious given these seem to be the only two columns
> your inserting as well. You don't indicate what the data types are
> either - it document is something like 'text' then using it in a
> distinct clause is likely to have huge performance impact.
>
> The first thing I'd do is to eliminate duplicates from your temp table
> as a separate statement or by pre-filtering the CSV before import. I
> would then try something like an outer join to identify rows in your
> temp table which don't exist in your final table and select from there
> to insert into the final table. You don't really need the distinct in
> the sub query as all you really need to know is if (name, document)
> exists - it doesn't matter if more than one exists (for this test).
>
> If you really don't have something more specific for a primary key,
> depending on what data type 'document' is and how large it is, you may
> find adding a column which is a checksum of your 'document' field a
> useful addition. I have done this in the past where I had an application
> where name was not unique and we only wanted distinct instances of
> 'document' (document was a fairly large XML document in this case).
>
> --
> Tim Cross
>
>

--
Adrian Klaver
adrian(dot)klaver(at)aklaver(dot)com

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