Re: pg_dump being killed by oom killer

From: Paul Warren <pw(at)researchresearch(dot)com>
To: JotaComm <jota(dot)comm(at)gmail(dot)com>
Cc: Sergey Klochkov <klochkov(at)iqbuzz(dot)ru>, "pgsql-admin(at)postgresql(dot)org" <pgsql-admin(at)postgresql(dot)org>
Subject: Re: pg_dump being killed by oom killer
Date: 2013-11-01 10:46:06
Message-ID: CALn4Y7GfsM+TUkyaYu3kx8vo2RUSEVzEoXWmG0zrOm4euucCPA@mail.gmail.com
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Yesterday I turned off the oom killer on the psychical server rather then
on the VM the vm is running on promox which is a container so oom killer
wasn't a option to turn off on the vm. When I did this it caused the server
to run out of memory, I rebooted server and pg dump now doesn't get killed
by oom killer but it now runs then uses most fo the ram up and then hangs
on terminal and i ended up killing it with loads of pg_dump command not
found errors

On Wed, Oct 30, 2013 at 12:31 PM, JotaComm <jota(dot)comm(at)gmail(dot)com> wrote:

> Hello,
>
>
> 2013/10/29 Paul Warren <pw(at)researchresearch(dot)com>
>
>> root(at)www1:/# ulimit -m
>> unlimited
>>
>> And parameters: overcommit_memory and overcommit_ratio.
>
>>
>>
>> On Tue, Oct 29, 2013 at 1:06 PM, Sergey Klochkov <klochkov(at)iqbuzz(dot)ru>wrote:
>>
>>> Hello Paul,
>>>
>>> If so, what does ulimit -m show?
>>>
>>>
>>> 29.10.2013 17:04, Paul Warren пишет:
>>>
>>>> Hey,
>>>>
>>>> I think it might not be a issue with pg_dump / db etc but more to do
>>>> with proxmox and it's container limits, this is a VM running on proxmox
>>>> and could be the cause of the issue. Will look into that first and come
>>>> back if it's not.
>>>>
>>>>
>>>> thanks
>>>> Paul
>>>>
>>>>
>>>> On Tue, Oct 29, 2013 at 1:01 PM, Sergey Klochkov <klochkov(at)iqbuzz(dot)ru
>>>> <mailto:klochkov(at)iqbuzz(dot)ru>> wrote:
>>>>
>>>> Hello Paul,
>>>>
>>>> Recently I've run into similar issue, see my message to this mailing
>>>> list sent on October 1st, 2013. It happens if there is a large
>>>> enough amount of rows in pg_largeobject of the relevant database.
>>>> pg_dump loads metadata (owner, access rights, etc) of each large
>>>> object deparately until it is out of memory. How many large objects
>>>> are in your DB?
>>>>
>>>> Hope this helps.
>>>>
>>>> 29.10.2013 16:17, Paul Warren пишет:
>>>>
>>>> Hi,
>>>>
>>>> I'm to the lists so bare with me please.
>>>>
>>>> I have a vm running debian 6 with linux kernel 2.6.32-11-pve,
>>>> when i run
>>>> pg_dump -Fc -U postgres db name > db name.dump
>>>>
>>>> after so long the process is killed, when I look in the
>>>> /var/log/kern.log i see the following entry
>>>> Oct 29 12:07:14 www1 kernel: OOM killed process 0 (pg_dump)
>>>> vm:5269904kB, rss:5210224kB, swap:0kB
>>>>
>>>>
>>>> The vm has 16 cpu's and is using around 10%, when I run pg_dump
>>>> it goes
>>>> up by 3 / 5 % so not using alot of cpu usage. IT has 30gb of ram
>>>> and 1gb
>>>> of swap, the system uses around 2mb of swap and 15gb of ram,
>>>> when
>>>> pg_dump runs the swap doesn't move but the ram goes up by 3 / 4
>>>> gb
>>>> before the process is killed.
>>>>
>>>> The machine had only 20gb of ram so I've increased the ram
>>>> usage and
>>>> still get the same issue. if I run pg_dump on any other db it
>>>> works
>>>> fine, if we run a pg_dump script by table on the failing
>>>> database it
>>>> works fine.
>>>>
>>>> The backup is going directly to a nas device which has 1.2 tb
>>>> free. The
>>>> vm has aroudn 40gb free as well.
>>>>
>>>> Any ideas what this could be? it seems to be a memory issue but
>>>> I can't
>>>> seem to see what / why it's happening.
>>>>
>>>> oh the DB is around 1.5 gb / 2gb in size
>>>>
>>>>
>>>> Thanks
>>>> Paul
>>>>
>>>>
>>>>
>>>> --
>>>> Best regards, Klochkov Sergey
>>>> www.iqbuzz.ru <http://www.iqbuzz.ru>
>>>>
>>>>
>>>>
>>>
>>> --
>>> С уважением, Клочков Сергей
>>> www.iqbuzz.ru
>>>
>>
>>
>
> Best regards
> --
> JotaComm
> http://jotacomm.wordpress.com
>

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