poor pefrormance with regexp searches on large tables

From: Grzegorz Blinowski <g(dot)blinowski(at)gmail(dot)com>
To: pgsql-performance(at)postgresql(dot)org
Subject: poor pefrormance with regexp searches on large tables
Date: 2011-08-10 14:26:18
Message-ID: CAF=aNMHHzBKE8_P0LykDb8Bvk7eHKdytcZ9xAkz=gtpeTj87+w@mail.gmail.com
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Dear All,

I have some problems with regexp queries performance - common sense tells me
that my queries should run faster than they do.

The database - table in question has 590 K records, table's size is 3.5GB. I
am effectively querying a single attribute "subject" which has an average
size of 2KB, so we are doing a query on ~1GB of data. The query looks more
or less like this:

SELECT T.tender_id FROM archive_tender T WHERE
(( T.subject !~* '\\mpattern1.*\\M' ) AND ( T.subject ~* '\\mpattern2\\M' OR
[4-5 more similar terms] ) AND T.erased = 0 AND T.rejected = 0
ORDER BY
tender_id DESC
LIMIT
10000;

The planner shows seq scan on subject which is OK with regexp match.

Now, the query above takes about 60sec to execute; exactly: 70s for the
first run and 60s for the next runs. In my opinion this is too long: It
should take 35 s to read the whole table into RAM (assuming 100 MB/s
transfers - half the HDD benchmarked speed). With 12 GB of RAM the whole
table should be easily buffered on the operating system level. The regexp
match on 1 GB of data takes 1-2 s (I benchmarked it with a simple pcre
test). The system is not in the production mode, so there is no additional
database activity (no reads, no updates, effectively db is read-only)

To summarize: any idea how to speed up this query? (please, don't suggest
regexp indexing - in this application it would be too time consuming to
implement them, and besides - as above - I think that Postgres should do
better here even with seq-scan).

Server parameters:
RAM: 12 GB
Cores: 8
HDD: SATA; shows 200 MB/s transfer speed
OS: Linux 64bit; Postgres 8.4

Some performance params from postgresql.conf:
max_connections = 16
shared_buffers = 24MB
temp_buffers = 128MB
max_prepared_transactions = 50
work_mem = 128MB
maintenance_work_mem = 1GB
effective_cache_size = 8GB

Database is vacuumed.

Regards,

Greg

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