Re: Queries intermittently slow

From: Scott Rankin <srankin(at)motus(dot)com>
To: Tom Lane <tgl(at)sss(dot)pgh(dot)pa(dot)us>
Cc: "pgsql-performance(at)postgresql(dot)org" <pgsql-performance(at)postgresql(dot)org>
Subject: Re: Queries intermittently slow
Date: 2016-01-06 15:30:56
Message-ID: 7EC59C76-D8FF-4880-8A50-9F1195D5D00E@motus.com
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On 1/6/16, 10:19 AM, "Tom Lane" <tgl(at)sss(dot)pgh(dot)pa(dot)us> wrote:

>Scott Rankin <srankin(at)motus(dot)com> writes:
>> I’m trying to track down why some queries on my database system are intermittently much slower than usual. I have some queries that run, on average, 2-3ms, and they run at a rate of about 10-20 queries/second. However, every 3-5 seconds, one of the queries will be 500-100ms. This is making the average query time turn out to be closer to 20ms, with a very large standard deviation.
>
>> This happens to a number of otherwise very fast queries, and I’m trying to trace the reason. I’ve turned on lock logging and checkpoint logging, and this behavior happens whether or not a checkpoint is occurring. There are no lock waits happening in the system either.
>
>I doubt you've proved that --- log_lock_waits will only report on waits
>longer than deadlock_timeout, which you don't appear to have changed from
>its default of 1 sec. If you're trying to capture events that last a few
>hundred msec, you're going to need to reduce deadlock_timeout to maybe
>100ms.
>
>It would help to know more about what the queries are, too. The cause
>might be something like GIN index pending-list cleanup but we can't tell
>on the basis of this much info.
>
>regards, tom lane

Hi Tom,

Thanks for the update. The query in question is a pretty simple one - it joins 3 tables, all of which are static - they don’t have any writes being done against them. They have very few rows, and the query plan for them indicates that they are all sequential scans. When doing an EXPLAIN ANALYZE, the delay is not consistently on one table, it can vary between the three tables involved in the query.

Here is the query plan for a fast run:

"Nested Loop (cost=0.00..4.20 rows=1 width=185) (actual time=0.069..0.069 rows=0 loops=1)"
" Join Filter: (be.branding_id = b.branding_id)"
" Rows Removed by Join Filter: 1"
" -> Nested Loop (cost=0.00..3.19 rows=1 width=189) (actual time=0.040..0.057 rows=1 loops=1)"
" Join Filter: (s.setting_id = be.setting_id)"
" Rows Removed by Join Filter: 41"
" -> Seq Scan on branding_extension be (cost=0.00..1.00 rows=1 width=8) (actual time=0.008..0.008 rows=1 loops=1)"
" -> Seq Scan on setting s (cost=0.00..2.04 rows=42 width=185) (actual time=0.004..0.018 rows=42 loops=1)"
" -> Seq Scan on branding b (cost=0.00..1.01 rows=1 width=4) (actual time=0.006..0.008 rows=1 loops=1)"
" Filter: ((name)::text = 'crs'::text)"
" Rows Removed by Filter: 1"
"Total runtime: 0.150 ms"

And for a slow one:

"Nested Loop (cost=0.00..4.20 rows=1 width=185) (actual time=383.862..383.862 rows=0 loops=1)"
" Join Filter: (be.branding_id = b.branding_id)"
" Rows Removed by Join Filter: 1"
" -> Nested Loop (cost=0.00..3.19 rows=1 width=189) (actual time=383.815..383.849 rows=1 loops=1)"
" Join Filter: (s.setting_id = be.setting_id)"
" Rows Removed by Join Filter: 41"
" -> Seq Scan on branding_extension be (cost=0.00..1.00 rows=1 width=8) (actual time=383.776..383.776 rows=1 loops=1)"
" -> Seq Scan on setting s (cost=0.00..2.04 rows=42 width=185) (actual time=0.005..0.037 rows=42 loops=1)"
" -> Seq Scan on branding b (cost=0.00..1.01 rows=1 width=4) (actual time=0.007..0.009 rows=1 loops=1)"
" Filter: ((name)::text = 'crs'::text)"
" Rows Removed by Filter: 1"
"Total runtime: 383.920 ms"

I will look at changing the deadlock_timeout, but that might have to wait for the weekend since this is a production system.

Thanks,
Scott
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